Showing 2 results for Pcr.
M. Shabanian, H. Masomi, A. Hoseinipour, J. Heidarnejad, Z. Azami,
Volume 11, Issue 1 (4-2007)
Abstract
Cucumber cultivars, grown in greenhouse in the Jiroft region, were surveyed for the relative incidence of Zucchini yellow mosaic virus (ZYMV), Watermelon mosaic virus-2 (WMV-2), Cucumber mosaic virus (CMV) and Tomato spotted wilt virus (TSWV) from 2001 to 2004. Samples from 1294 plants representing different cultivars were analysed by Enzyme-linked immunosorbent assay (ELISA) and Dot immunobinding assay (DIBA). The data showed that green-house cucumbers are infected by CMV, ZYMV, TSWV and WMV-2. However, ZYMV was the most prevalent virus. Mixed infection including double and triple infection was identified in some samples. Transmission of aphid-borne viruses (CMV, ZYMV and WMV-2) by Aphis gossypii, A. fabae, A. craccivora and Myzus persicae revealed that ZYMV is most efficiently vectored by these aphids and, A. craccivora transmitted these viruses with more than 60% efficiency. In addition, WMV-2 was not transmitted by A. gossypii. In RT-PCR, ZYMV infection was confirmed by amplifying a PCR product of the predicated size 458 bp, using total RNA extracted from infected plants. All ZYMV infected samples reacted with monoclonal antibodies (705-1, 705-2 and 705-4) in TAS-ELISA test. These results showed that ZYMV isolate collected from Jiroft belongs to group A, cluster 1 or 2. In electron microscopy study, normal length of ZYMV flexuous particles in partial purified preparation was calculated as 790 nm. The molecular weight of coat protein of ZYMV was estimated at 36 KDa., using SDS-PAGE and western blotting. This is the first report of these viruses in greenhouse grown cucumber in the Jiroft region.
Zh Osamny, A Siosemardeh,
Volume 13, Issue 47 (4-2009)
Abstract
Studying genetic diversity is important because a decrease in genetic variability might result in a reduction of the plasticity of the crops to respond to changes in climate, pathogen populations, or agricultural practices. In this study, 72 Sardari wheat (Triticum aestivum L.) ecotypes were analyzed by AFLP markers and 17 phenotypic characters. Three pairs of EcoRI/MseI primer combinations produced 1582 polymorphic bands (with mean percentage of polymorphic 73.92%). Cluster analysis using Jaccard coefficient and the entire AFLP data divided all ecotypes into eight major groups. Mean, coefficient of variation, phenotypic, genotypic and environment variance were calculated in each quantitative character. Cluster analysis using Euclidian distance through the quantitative characters divided all ecotypes into six major groups. Comparison of genetic distances obtained from AFLP and agronomic data showed low correlation between the two diversity measurements (0.02). The results showed a high degree of genetic diversity between the Sardari ecotypes, suggesting that Sardari is not a single cultivar, but it is the mass of ecotypes and could be introduced in the gene bank.
